Trajectory Viewer
=================

.. raw:: html
    :file: _static/track.html

.. image:: ./images/ngl.png
| 
.. raw:: html

    <script src="ngl.embedded.min.js">
    </script>
    
    <script>
    
      // adapted from NGL and MDAnalysis websites

      if( !Detector.webgl ) Detector.addGetWebGLMessage();
    
      NGL.mainScriptFilePath = "ngl.embedded.min.js";
    
      function onInit(){
          var stage = new NGL.Stage( "viewport" );
          stage.loadFile( "_static/1tsu.pdb", { defaultRepresentation: true } );
          stage.setTheme( "light" )
      
          window.addEventListener( "resize", function( event ){
             stage.handleResize();
          }, false );
      }
    
      document.addEventListener( "DOMContentLoaded", function() {
          NGL.init( onInit );
      } );
    
    </script>
    
    <div id="viewport" style="max-width:100%; height:400px;"></div>

.. note:: 

    Still work in progress. Please see source code in https://github.com/arose/nglview/

    or `try this online <http://mybinder.org/repo/hainm/notebook-pytraj/>`_


Requirement: jupyter notebook, nglview::

    # install notebook via conda.
    conda install jupyter notebook

    # install nglview
    pip install git+https://github.com/arose/nglview