Trajectory Viewer

Trajectory viewer in Jupyter notebook with nglview

Try me

_images/membrane_sim_try_me.png

Note

Source: Above pdb file was converted from dcd and psf files from http://www.ks.uiuc.edu/Training/Tutorials/ (Membrane Proteins Tutorial section)

How does the notebook look like?

_images/ngl.png

NGL - embedded

Note

Still work in progress. Please see source code in https://github.com/arose/nglview/

or try this online

Install

Please check nglview website